Publication and design

Publication director: Marc Mortureux
Editor-in-chief: Paul Martin
Assistant managing editor: Barbara Gouget
Editorial board: Maria Laura Boschiroli (ANSES, France), Sabine Delannoy (ANSES, France), Bertrand Lombard (ANSES, France), Stefano Morabito (ISS, Italie), Françoise Petter (OEPP), Elisabeth Repérant (ANSES, France), Hélène Gayon (SCL, France), Thierry Van Den Berg (Coda Cerva, Belgique), Eric Verdon (ANSES, France), Jan Zmudzki (NVRI, Pologne)
Creation/Development: Julien Vigneron, Céline Leterq, Fabrice Coutureau, Parimage

ISSN 2110-5294

Editorial
Journal No. 12, Summer 2014

>> Download complete journal (pdf)
Point of view
EuroReference No.7, 2012, Biotox Piratox
AMCRA : center of expertise on antimicrobial consumption and resistance in animals in Belgium

Bénédicte Callens (scientific collaborator, AMCRA - benedicte.callens@amcra.be) and Evelyne De Graef (coordinator, AMCRA)
This issue of EUROREFERENCE is devoted to microbiology surveillance networks in Europe. This account is obviously not intended to be exhaustive, but to demonstrate the usefulness of these networks via a few examples.
You will find descriptions (in greater or lesser detail) of the work of several such networks, in Belgium (
AMCRA: Center of expertise on Antimicrobial Consumption and Resistance in Animals in Belgium), Italy (Integrated veterinary networks for the surveillance of zoonotic agents in Italy) and France (Purpose and overview of results of the Vigimyc Network for the epidemiological surveillance of mycoplasmoses in ruminants in France; ACTEOLab-Salmonella: a tool for monitoring salmonellae of nonhuman origin), together with other European networks such as the database on Listeria monocytogenes set up by the EURL or the database on the genotypes of the Mycobacterium tuberculosis complex, serving a network that covers five continents. We have also included an article about a network involving a private company and a public university working together on the large-scale genotyping of Clustered Regularly Interspersed Short Palindromic Repeats (CRISPRs).
Lastly, the Point of View looks to the future, emphasising the importance of the IMMEM-10 Meeting in the ongoing development of concepts and techniques for the molecular characterization of bacteria and viruses for surveillance purposes. The journal naturally keeps an eye on some highly technical problems (see the video on
Trichinella) and regulatory issues (Methodological guide to the implementation of a process for airborne surface disinfection applied to containment areas).
We hope you enjoy this new issue!



The Editorial Board


Genomic epidemiological typing of pathogens: feedback on the IMMEM-10 Conference

Paul M. V. Martin (1) & Sylvain Brisse(2)
1. ANSES, Laboratoire de Lyon, France
2. Institut Pasteur, Paris, France


A CRISPR genotyping network in France and Europe: A 5-year experiment for Research, Training and Global Health.

Christophe Sola (1) (christophe.sola@u-psud.fr), Guislaine Refrégier (1) et Michel Gomgnimbou (1),(2).
1. Institut de génétique et microbiologie, équipe IGEPE et services de génotypage « Beads4Med », CNRS-université Paris-Sud, UMR8621, Orsay, France.
2. Centre Muraz, Bobo-Dioulasso, Burkina Faso.

Video illustrating the artificial digestion method for Trichinella larvae detection in meat

Pauline Macé (1); Bruno Allouche (2) ; Aurélie Chevillot-Grasset (1) ; Aurélie Heckmann (1) ; Bruno Polack (1) ; Sandrine Lacour (1); Pascal Boireau (1) ; Isabelle Vallée (1).
1. UMR BIPAR ANSES - Enva - Upec ; ANSES, Maisons-Alfort Laboratory for Animal Health, France, laboratoire national de référence « Parasites transmis par les aliments », Maisons-Alfort, France
2. Ecole nationale vétérinaire d'Alfort, France


>see the video
Methodological guide to the implementation of a process for airborne surface disinfection applied to containment areas

P. Maris, S. Allix, S. Etienne, B. Garin Bastuji, B. Gassilloud, G. Lecarrou, N. Madani, P. Marianneau, E. Monchâtre-Leroy, F. Rizzo, E. Rousset,K. Sidi-Boumedine et S. Zini. French Agency for Food, Environmental and Occupational Health & Safety (ANSES), Maisons-Alfort, France
Focus on a laboratory
ACTEOLab-Salmonella : more than a database for the French Salmonella network, a tool for monitoring salmonellae of non-human origin

Renaud Lailler (1) (renaud.lailler@ANSES.fr), Isabelle Berta-Vanrullen (2) (isabelle.berta-vanrullen@ANSES.fr), Louis-Ziad Alexandre (3) (Louis-Ziad.Alexandre@ANSES.fr)
1. ANSES, Laboratoire de sécurité des aliments, Maisons-Alfort, France.
2. ANSES, Direction scientifique des laboratoires, Maisons-Alfort, France.
3. ANSES, Direction technique et informatique, Maisons-Alfort, France
Methods
Research
Integrated veterinary networks for the surveillance of zoonotic agents in Italy

Antonia Ricci (aricci@izsvenezie.it) - OIE/National Reference Laboratory for Salmonella
Istituto Zooprofilattico Sperimentale delle Venezie, Viale dell'Università 10, I 35020 Legnaro (PD), Italie
Agenda
Language: French
Language: English
www.anses.fr
EuroReference, Journal of reference, illustration image
Purpose and overview of results of the Vigimyc Network for the epidemiological surveillance of mycoplasmoses in ruminants in France

F. Poumarat (1),(2) (françois.poumarat@ANSES.fr), N. Jarrige (3), F. Tardy (1),(2)
1. ANSES, Lyon Laboratory, Joint Research Unit on mycoplasmoses in Ruminants, Lyon, France.
2. Université de Lyon, VetAgro Sup, Joint Research Unit on Mycoplasmoses in Ruminants, Marcy-l'Etoile, France.
3. ANSES, Lyon laboratory, Epidemiology Unit, Lyon, France.
Development of a European molecular typing database for food, environmental and veterinary Listeria monocytogenes strains

Benjamin Félix (1) (benjamin.felix@ANSES.fr), Corinne Danan (1), Pia Makela (2), Ivo Van Walle (3), Renaud Lailler (1), Thomas Texier (4), Bertrand Lombard (1), Anne Brisabois (1), Sophie Roussel (1)
1. University Paris-Est, ANSES, Laboratory for Food Safety, European Union Reference Laboratory for
Listeria monocytogenes, Maisons-Alfort, France.
2. EFSA, Unit of the Biological Monitoring Unit, EFSA, European Food Safety Authority, Via Carlo Magno 1A43126 Parma, Italy.
3. ECDC, European Centre for Disease Prevention and Control, Food- and Waterborne Diseases and Zoonoses Programme, Tomtebodavägen 11 A, SE-17183 Stockholm, Sweden
4. University Paris-Est, ANSES, Information Technology Services, Maisons-Alfort, France

The establishment of databases on circulating genotypes of Mycobacterium tuberculosis complex and web tools for an effective response to better monitor, understand and control the tuberculosis epidemic worldwide

David Couvin et Nalin Rastogi (nrastogi@pasteur-guadeloupe.fr) WHO Supranational TB Reference Laboratory, Institut Pasteur de la Guadeloupe, 97183 Abymes, Guadeloupe, France.